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Phylogenic analysis of the M genes of influenza viruses isolated from free-flying water birds from their Northern Territory to Hokkaido, Japan

Identifieur interne : 001312 ( Main/Exploration ); précédent : 001311; suivant : 001313

Phylogenic analysis of the M genes of influenza viruses isolated from free-flying water birds from their Northern Territory to Hokkaido, Japan

Auteurs : Rashid Manzoor [Japon] ; Yoshihiro Sakoda [Japon] ; Aaron Mweene [Japon] ; Yoshimi Tsuda [Japon] ; Noriko Kishida [Japon] ; Gui-Rong Bai [Japon] ; Ken-Ichiro Kameyama [Japon] ; Norikazu Isoda [Japon] ; Kosuke Soda [Japon] ; Michiko Naito [Japon] ; Hiroshi Kida [Japon]

Source :

RBID : ISTEX:19784506787A5FBF76AEC2F14429B05433353387

English descriptors

Abstract

Abstract: During 2000–2007, 218 influenza viruses of 28 different combinations of HA (H1–H13) and NA (N1–N9) subtypes were isolated from fecal samples of free-flying water birds at two distant lakes in Hokkaido, Japan. Phylogenic analysis of the matrix (M) genes of 67 strains, selected on the basis of their subtype combinations, revealed that A/duck/Hokkaido/W95/2006 (H10N8) was a reassortant whose M gene belonged to North American non-gull-avian and the other seven genes to Eurasian non-gull-avian lineages. The M genes of other 65 strains belonged to Eurasian non-gull-avian and the one to Eurasian-gull lineages. The M genes of 65 strains were grouped into three different sublineages, indicating that influenza viruses circulating in different populations of free-flying water birds have evolved independently in nature.

Url:
DOI: 10.1007/s11262-008-0248-7


Affiliations:


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Le document en format XML

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<div type="abstract" xml:lang="en">Abstract: During 2000–2007, 218 influenza viruses of 28 different combinations of HA (H1–H13) and NA (N1–N9) subtypes were isolated from fecal samples of free-flying water birds at two distant lakes in Hokkaido, Japan. Phylogenic analysis of the matrix (M) genes of 67 strains, selected on the basis of their subtype combinations, revealed that A/duck/Hokkaido/W95/2006 (H10N8) was a reassortant whose M gene belonged to North American non-gull-avian and the other seven genes to Eurasian non-gull-avian lineages. The M genes of other 65 strains belonged to Eurasian non-gull-avian and the one to Eurasian-gull lineages. The M genes of 65 strains were grouped into three different sublineages, indicating that influenza viruses circulating in different populations of free-flying water birds have evolved independently in nature.</div>
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